or for those curious about some of the basic mechanics of graph visualization. Four easy-to-program network layout techniques are discussed, with details given for implementing each one: ...

Abstract: In de novo genome assembly using short Illumina reads, the accurate determination of node and arc multiplicities in a de Bruijn graph has a large impact on the quality and contiguity of the ...

We integrated our C++ core with Python via pybind11 to enable flexible experimentation and evaluation. ├── input/ # Datasets (edges and features) ├── src/ # Core C++ source code (Graph, Node, ...

OUTPUT ## Small graph: 5 vertices, 5 edges Contact Graph: (5, 2) (5, 3) Infectable Graph: (5, 2) (2, 3) Path graph: (5, 2) (3, 3) src dst wt 1 0 2 10 2 3 0 9 distance vertex predecessor 0 9.0 3 0 1 10 ...